CDS

Accession Number TCMCG015C43522
gbkey CDS
Protein Id XP_027075453.1
Location complement(join(15966555..15966642,15966783..15966870,15967001..15967074,15968009..15968169,15968243..15968262,15968265..15968331,15968410..15968484,15969309..15969380,15969531..15969703,15969807..15969921,15971156..15971269,15971791..15971870,15972028..15972115,15972242..15972298,15972690..15972778,15972834..15972927,15973048..15973085,15973088..15973154,15974023..15974121,15974244..15974299,15974302..15974362,15975076..15975162,15977002..15977073,15977213..15977279,15979626..15979714,15979815..15979892,15980494..15980631,15980718..15980853,15980992..15981103,15981106..15981186,15981634..15981678,15981681..15981792,15982058..15982164,15983031..15983141,15983306..15983549))
Gene LOC113699351
GeneID 113699351
Organism Coffea arabica

Protein

Length 1089aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027219652.1
Definition LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA polymerase
KEGG_TC -
KEGG_Module M00262        [VIEW IN KEGG]
KEGG_Reaction R00375        [VIEW IN KEGG]
R00376        [VIEW IN KEGG]
R00377        [VIEW IN KEGG]
R00378        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K02327        [VIEW IN KEGG]
EC 2.7.7.7        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03030        [VIEW IN KEGG]
ko03410        [VIEW IN KEGG]
ko03420        [VIEW IN KEGG]
ko03430        [VIEW IN KEGG]
ko03440        [VIEW IN KEGG]
ko05166        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03030        [VIEW IN KEGG]
map03410        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
map03430        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
map05166        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0004529        [VIEW IN EMBL-EBI]
GO:0004536        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006284        [VIEW IN EMBL-EBI]
GO:0006287        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006297        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008296        [VIEW IN EMBL-EBI]
GO:0008408        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016796        [VIEW IN EMBL-EBI]
GO:0016895        [VIEW IN EMBL-EBI]
GO:0030894        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0032993        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042575        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043596        [VIEW IN EMBL-EBI]
GO:0043601        [VIEW IN EMBL-EBI]
GO:0043625        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045004        [VIEW IN EMBL-EBI]
GO:0045005        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCAACACCGGCAACAGCAGAAAACGGCCTCCGCCGCCGGCGTCTTCGCAACATCCGCAGCAGAAGCACCATGCTGCGATGGAAGACGACGAGGGAGACGAGGACAACTATTACCTCGACGAAACCCCACTTCCCCTGAACAAAGAAGACACCCAAGCCCTGCGTGAAGCCGAGGAGCGGCTGCAAAAATGGAAGCGGCCTCCGCTTTCTCAACTTTACACCTCACAGTCTCAGAGCATCGTATTTCAACAGCTGGAAATTGACTATGTGATTGGCGAGAGTCATAAAGAATTGCTGCCTAAGTCTTCTGGTGTTGCTCCTATTTTGAGAATCTTTGGTGTCACCAAAGAAGGACATAGTGTTTGCTGTCACGTACATGGGTTTGAACCTTATTTCTACATCAGCTGCCCTCCAGGAATGGGTCCTGATGACATTTCGCGTTTTCATCAAATTCTCGAGGGAAGGATGAGAGATGTGAACAGGAATAGCAATGTTCCTTATTTTGTGCGGCGGGTTGAATTGGTTCAGAGAAGAAGCATAATGTATTATCAACAGCAGAATTCTCAGCCTTCTAAGATAGTAGTGGCATTGCCAACAATGGTTACCAGCTGTCGTGGTATCCTGGACAGAGGCATACAAATTGATGGGCTTGGCTTGAAGAGCTTTATGACGTATGAGAGTAATATTCTGTTTGCTCCGTTCATGATTGATTGCAATATTGTTGGTGGGAATTGGATTGAAGTGCCAGTAGGAAAATATATAAAGAAAGCGAAAAACCTGTCCTACTGCCAGTTGGAGTTTGACTGTCTTTACACAGACTTAGTTAGCCATGTTCCTGAAGGAGAATTCTCAAAGATGGCTCCCTTTCGCATTTTAAGTTTTGACATAGAGTGTGCAGGTCGTAAAGGTCTTTTCCCTGAGCCCATCCATGATCCTGTTATCCAGGTGGCCAATGTAGTTACATTGCAGGGACAGGATCAGCCATTTGTTCGTAATGTAATGACGCTTAAGTCGTGCTCACCTATTGCTGGCGTTGATGTTATGTCCTTTGACACCGAGAAAGAGGTCTTACTTGCTTGGCGGGATTTTATCCGTGAAGTGGACCCTGACATTATAATTGGGTATAACATCTGCAAGTTCGATCTGCCCTATCTTATTGAGGCTAAAGTGCTAGGAATAACAGAGTTTCCTTTACTTGGACGGATCATAAACAGCAAAGTCCGTGTCAAAGATACTACATTTTCTTCAAGACAATACGGTACCAGGGAAAGTAAAGAAGTTACAATAGAAGGGAGAGTTCAATTTGACTTGCTTCAGGTTATGCAGAGGGATTATAAGTTAAGTTCGTATTCATTGAACTCAGTCTCTGCACATTTCCTTAATGAGCAGAAGGAGGATGTTCACCATTCAATCATATCTGACCTTCAGAATGGGAACTCAGACACAAGGATGCGTCTCGCTAAGTATTGTTTGAAGGATGCTTATCTCCCACAACGGCTTTTGGACAAATTGATGTTCATTTACAACTATGTGGAGACCCGAGTAACAGGTGTCCCTATCTCATTTCTTCTCTCAAGAGGGCAGAGCATTAAGGTGTTATCTCAACTTCTTAGGAAAGCAAAACAAAAGAATCTTGTTATTCCCAATGCGAAACAGGCCGGATCTGAACAAGGAACATTTGAGGGTGCAACTGTTTTGGAAGCCAGTGCAGGATTTTTTGAGAAGCCTATTGCAACACTTGATTTTGCATCTCTGTATCTCATTATGATGGCTTATAATCTGTGTTACTGTACATTGGTAACTCCTGAAGACATGCGTAGACTTAACCTTCCTCCAGAATGGGTCACTAAAACTCCATCTGGTGACACATTTGTCAAAACAAATTTAGAAGTAATGTGTTAAATGTTGCTTCAGGGAATACTTCCAGAAATTCTTGAAGAACTGTTGGCTGCTCGTAAAAGGGCAAAAGCAGACTTGAAGGAAGCGAGGGATCCTCTGGTAAAAGCTGTTTTAGATGGTCGTCAACTGGCTCTGAAGATAAGTGCAAATTCTGTATATGGGTTTACGGGAGCTACAGTGGGTCAACTACCTTGTCTAGAAATATCTTCGAGTGTCACAAGTTATGGTCGACAGATGATTGAACACACCAAGAAACTGGTGGAAGATAAATTCACAGTGCTTGGGGGCTATGAACATAATGCTGAGGTAATATATGGAGATACAGATTCTGTGATGGTGCAATTTGGCGTCCCTACAGTTGAAGAAGCTATGAACCTAGGTAGAGAAGCTGCTGACTACATTAGCGGAACTTTCACGAAACCAATAAAGTTGGAGTTTGAGAAGGTATATTATCCATATCTATTAATTAGCAAGAAGAGATACGCTGGCCTTCTTTGGACAAATCCCAATAAGTTTGACAAAATGGATGCTAAAGGGATTGAAACAGTTCGAAGAGATAACTGTCTATTGGTCAAAAACCTTGTAACTGAATGTCTTCACAAAATACTAATAGACAGGGATGTTCCTGGTGCCGTGCAATATGTCAAGAATACCATTGCAGATCTTCTTATGAATCGTGTGGATTTGTCTCTTTTGGTGATTACTAAGGGTCTCACAAAAACTGGAGATGATTATGAAGTCAAGGCAGCACATGTTGAACTTGCAGAGCGGATGCGGAAGCGTGATGCTGCTACTGCACCAAATGTTGGGGATCGAGTTCCTTATGTGATTATTAAAGCTGCGAAAGGTGCCAAGGCTTACGAAAGGTCTGAAGATCCTGTCTATGTATTAGACAATAACATACCTATTGATCCCCACTACTTTGAAAACCAAATCAGCAAGCCACTACTTAGAATATTTGAACCCATTCTGAAGAACGCTAGTAAGGAGCTTCTTCAAGGGAGTCATACAAGATCCATTTCCATCTCTACTCCTTCCACTGGTGGCATAATGAAATTTGCTAAGAAGCAACTCACCTGCATTGGTTGCAAAGCTTTAATCAGTAATACAGATCACACACTTTGCTCGAACTGCAAGGGAAGAGAAGCTGAATTGTATTGCAAATCAGTTGCTAATGTGTCCGAGTTGGAGAAGCTTTTTGGAAGGCTATGGACCCAATGCCAAGAGTGCCAAGGCTCTCTTCACCAGGATGTGCTTTGCACAAGTCGGGATTGCCCCATATTTTACCGGAGGAAGAAGGCACAGAAGGACATGGCTGAAGCAAAGCTTCAGCTGGACCGGTGGAATTTCTAA
Protein:  
MSNTGNSRKRPPPPASSQHPQQKHHAAMEDDEGDEDNYYLDETPLPLNKEDTQALREAEERLQKWKRPPLSQLYTSQSQSIVFQQLEIDYVIGESHKELLPKSSGVAPILRIFGVTKEGHSVCCHVHGFEPYFYISCPPGMGPDDISRFHQILEGRMRDVNRNSNVPYFVRRVELVQRRSIMYYQQQNSQPFXKIVVALPTMVTSCRGILDRGIQIDGLGLKSFMTYESNILFALXFMIDCNIVGGNWIEVPVGKYIKKAKNLSYCQLEFDCLYTDLVSHVPEGEFSKMAPFRILSFDIECAGRKGLFPEPIHDPVIQVANVVTLQGQDQPFVRNVMTLKSCSPIAGVDVMSFDTEKEVLLAWRDFIREVDPDIIIGYNICKFDLPYLIEAKVLGITEFPLLGRIINSKVRVKDTTFSSRQYGTRESKEVTIEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLNEQKEDVHHSIISDLQNGNSDTRMRLAKYCLKDAYLPQRLLDKLMFIYNYVEMXRVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNAKQAGSEQGTFEGATVLEASAGFFEKPIATLDFASLYPXIMMAYNLCYCTLVTPEDMRRLNLPPEWVTKTPSGDTFVKTNLEVMCXMLLQGILPEILEELLAARKRAKADLKEARDPLVKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTVLGGYEHNAEVIYGDTDSVMVQFGVPTVEEAMNLGREAADYISGTFTKPIKLEFEKVYYPYLLISKKRYAGLLWTNPNKFDKMDAKGIETVRRDNCLLVKNLVTECLHKILIDRDVPGAVQYVKNTIADLLMNRVDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPVYVLDNNIPIDPHYYXENQISKPLLRIFEPILKNASKELLQGSHTRSISISTPSTGGIMKFAKKQLTCIGCKALISNTDHTLCSNCKGREAELYCKSVANVSELEKLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF